This commit introduces support for Ollama as an alternative Large Language Model (LLM) provider and enhances PDF image extraction capabilities.
- **Ollama Integration:**
- Implemented `set_ollama_config` to configure Ollama's base URL from `config.ini`.
- Modified `llm.py` to dynamically select and configure the LLM (Gemini or Ollama) based on the `PROVIDER` setting.
- Updated `get_model_name` to return provider-specific default model names.
- `pdf_convertor.py` now conditionally initializes `ChatGoogleGenerativeAI` or `ChatOllama` based on the configured provider.
- **PyMuPDF Image Extraction:**
- Added a new `extract_images_from_pdf` function using PyMuPDF (`fitz`) for direct image extraction from PDF files.
- Introduced `get_extract_images_from_pdf_flag` to control this feature via `config.ini`.
- `convert_pdf_to_markdown` and `refine_content` functions were updated to utilize this new image extraction method when enabled.
- **Refinement Flow:**
- Adjusted the order of `save_md_images` in `main.py` and added an option to save the refined markdown with a specific filename (`index_refined.md`).
- **Dependencies:**
- Updated `pyproject.lock` to include new dependencies for Ollama integration (`langchain-ollama`) and PyMuPDF (`PyMuPDF`), along with platform-specific markers for NVIDIA dependencies.
254 lines
8.2 KiB
Python
Executable File
254 lines
8.2 KiB
Python
Executable File
import re
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import base64
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import os
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from docling.datamodel.accelerator_options import AcceleratorDevice, AcceleratorOptions
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from docling.datamodel.base_models import InputFormat
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from docling.datamodel.pipeline_options import (
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PdfPipelineOptions,
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)
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from docling_core.types.io import DocumentStream
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from docling.datamodel.settings import settings
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from docling.document_converter import DocumentConverter, PdfFormatOption
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from docling_core.types.doc.base import ImageRefMode
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from langchain_core.messages import HumanMessage
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from langchain_google_genai import ChatGoogleGenerativeAI
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from langchain_ollama import ChatOllama
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from llm import set_api_key, get_model_name, get_temperature
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from io import BytesIO
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from pathlib import Path
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import configparser
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import fitz
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def save_md_images(
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output: str | Path,
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md_content: str,
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images: dict[str, bytes],
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md_name: str = "index.md",
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images_dirname: str = "images",
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):
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output = Path(output)
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md_path = output.joinpath(md_name)
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md_path.parent.mkdir(exist_ok=True, parents=True)
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images_dir = output.joinpath(images_dirname)
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images_dir.mkdir(exist_ok=True, parents=True)
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for image_name in images.keys():
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image_path = images_dir.joinpath(Path(image_name).name)
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with open(image_path, "wb") as image_file:
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image_file.write(images[image_name])
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md_content = md_content.replace(
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f"]({image_name})",
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f"]({image_path.relative_to(md_path.parent, walk_up=True)})",
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)
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with open(md_path, "w") as md_file:
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md_file.write(md_content)
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def load_md_file(md_path: str | Path) -> tuple[str, dict[str, bytes]]:
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md_path = Path(md_path)
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with open(md_path, "r") as md_file:
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md = md_file.read()
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images: list[str] = re.findall(r"!\[.*?\]\((.*?)\)", md)
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image_dict: dict[str, bytes] = dict()
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for i in range(len(images)):
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image_path = images[i]
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if image_path.startswith("data:image/png;base64,"):
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image_dict[f"{i}.png"] = image_path.removeprefix(
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"data:image/png;base64,"
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).encode("UTF-8")
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else:
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with open(
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Path(md_path.parent).joinpath(image_path), "rb"
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) as image_file:
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image_dict[image_path] = image_file.read()
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return (md, image_dict)
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def convert_pdf_to_markdown(pdf: bytes) -> tuple[str, dict[str, bytes]]:
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"""Converts a PDF document to Markdown format."""
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accelerator_options = AcceleratorOptions(
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num_threads=16, device=AcceleratorDevice.CUDA
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)
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pipeline_options = PdfPipelineOptions()
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pipeline_options.accelerator_options = accelerator_options
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pipeline_options.do_ocr = True
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pipeline_options.do_table_structure = True
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pipeline_options.table_structure_options.do_cell_matching = True
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pipeline_options.generate_page_images = True
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pipeline_options.generate_picture_images = True
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converter = DocumentConverter(
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format_options={
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InputFormat.PDF: PdfFormatOption(
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pipeline_options=pipeline_options,
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)
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}
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)
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# Enable the profiling to measure the time spent
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settings.debug.profile_pipeline_timings = True
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# Convert the document
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conversion_result = converter.convert(
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source=DocumentStream(name="", stream=BytesIO(pdf))
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)
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doc = conversion_result.document
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doc.pictures
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md = doc.export_to_markdown(
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image_mode=ImageRefMode.EMBEDDED,
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)
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images: list[str] = re.findall(r"!\[Image\]\((.*?)\)", md)
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image_dict: dict[str, bytes] = dict()
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for i in range(len(images)):
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data = images[i].removeprefix("data:image/png;base64,")
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img_data = base64.b64decode(data)
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image_dict[f"{i}.png"] = img_data
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md = md.replace(images[i], f"{i}.png")
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return (md, image_dict)
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def refine_content(md: str, images: dict[str, bytes], pdf: bytes) -> str:
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"""Refines the Markdown content using an LLM."""
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config = configparser.ConfigParser()
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config.read("config.ini")
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provider = config.get("llm", "PROVIDER", fallback="gemini")
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set_api_key(provider)
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try:
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if provider == "gemini":
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llm = ChatGoogleGenerativeAI(
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model=get_model_name(), temperature=get_temperature()
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)
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elif provider == "ollama":
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llm = ChatOllama(
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model=get_model_name(),
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temperature=get_temperature(),
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base_url=os.environ["OLLAMA_BASE_URL"],
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num_ctx=256000,
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num_predict=-1,
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)
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else:
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raise ValueError(f"Unsupported LLM provider: {provider}")
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except Exception as e:
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raise BaseException(
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f"Error initializing LLM. Make sure your LLM configuration is correct. Error: {e}"
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)
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with open("pdf_convertor_prompt.md", "r") as f:
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prompt = f.read()
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# 添加 Markdown
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human_message_parts = [{"type": "text", "text": prompt}]
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if provider == "gemini":
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human_message_parts.append(
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{
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"type": "media",
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"mime_type": "text/markdown",
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"data": base64.b64encode(md.encode("UTF-8")).decode("utf-8"),
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}
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)
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elif provider == "ollama":
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human_message_parts.append(
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{
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"type": "text",
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"text": md,
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}
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)
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# 添加图片
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for image_name in images.keys():
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human_message_parts.append(
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{
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"type": "text",
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"text": f"This is image: '{image_name}':\n",
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}
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)
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if provider == "gemini":
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human_message_parts.append(
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{
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"type": "media",
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"mime_type": "image/png",
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"data": base64.b64encode(images[image_name]).decode("utf-8"),
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}
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)
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if provider == "ollama":
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human_message_parts.append(
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{
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"type": "image_url",
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"image_url": f"data:image/png;base64,{base64.b64encode(images[image_name]).decode('utf-8')}",
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}
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)
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# 添加 PDF
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if provider == "gemini":
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human_message_parts.extend(
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[
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{
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"type": "text",
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"text": "This is original PDF file:\n",
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},
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{
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"type": "media",
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"mime_type": "application/pdf",
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"data": base64.b64encode(pdf).decode("utf-8"),
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},
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]
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)
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if provider == "ollama":
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doc = fitz.open(stream=pdf, filetype="pdf")
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for page_num in range(doc.page_count):
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page = doc.load_page(page_num)
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pix = page.get_pixmap()
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img_bytes = pix.tobytes("png")
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human_message_parts.append(
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{
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"type": "text",
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"text": f"This is page {page_num + 1} of the original PDF file:\n",
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}
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)
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human_message_parts.append(
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{
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"type": "image_url",
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"image_url": f"data:image/png;base64,{base64.b64encode(img_bytes).decode('utf-8')}",
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}
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)
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doc.close()
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message_content = [
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HumanMessage(content=human_message_parts), # type: ignore
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]
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print(
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f"Sending request to {provider} with the PDF, Markdown and referenced images... This may take a moment."
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)
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try:
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response = llm.invoke(message_content)
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refined_content = response.content
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except Exception as e:
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raise BaseException(f"An error occurred while invoking the LLM: {e}")
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if str(refined_content) == "":
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raise BaseException(f"Response of {provider} is empty")
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return fix_output(str(refined_content))
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def fix_output(md: str) -> str:
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if not md.startswith("['") or not md.endswith("']"):
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return md
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md = md.removeprefix("['")
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md = md.removesuffix("']")
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md = md.replace("\\n", "\n")
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md = md.replace("\", '", "\n\n")
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md = md.replace("', \"", "\n\n")
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md = md.replace("', '", "\n\n")
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return md
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